ECOD: domain e3amdB1

Domain ID e3amdB1

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: Cellulase

UID:	000425925
Type:	Automatic domain
Parent:	e1edgA1
Range:	B:1-312
PDB:	3amd
PDB Description:	Endoglucanase
UniProt:	Q9X273
Species:

Domains in the same chain:

Download Pymol

e3amdB1	B:1-312	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Domains in the same PDB:

e3amdA1	A:2-312	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3amdB1	B:1-312	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3amdC1	C:3-311	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3amdD1	D:2-312	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Structural contacts of domain e3amdB1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3amdC1	B:x,y,z->C:-X+1,Y-1/2,-Z+1	TIM barrels	Interaction Interface Pymol
e3amdC1	B:x,y,z->C:-X,Y-1/2,-Z+1	TIM barrels	Interaction Interface Pymol
e3amdC1	B:X,Y,Z->C:x,y,z	TIM barrels	Interaction Interface Pymol
e3amdD1	B:-X+1,Y-1/2,-Z+1->D:x,y,z	TIM barrels	Interaction Interface Pymol
e3amdD1	B:x,y,z->D:-X+1,Y-1/2,-Z+1	TIM barrels	Interaction Interface Pymol
e3amdD1	B:X,Y,Z-1->D:x,y,z	TIM barrels	Interaction Interface Pymol
e3amdD1	B:X,Y,Z->D:x,y,z	TIM barrels	Interaction Interface Pymol
e3amdB1	B:x,y,z->B:-X+1,Y-1/2,-Z+1	TIM barrels	Interaction Interface Pymol
e3amdB1	B:-X+1,Y-1/2,-Z+1->B:x,y,z	TIM barrels	Interaction Interface Pymol
e3amdA1	B:x,y,z->A:-X,Y-1/2,-Z+1	TIM barrels	Interaction Interface Pymol
e3amdA1	B:-X,Y-1/2,-Z+1->A:x,y,z	TIM barrels	Interaction Interface Pymol
e3amdC1	B:x,y,z->C:X,Y-1,Z	TIM barrels	Interaction Interface Pymol