Domain ID e3aqpB5

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel
  • F: SecDF_P1_head
UID: 001710248
Type: Automatic domain
Parent: e3aqpA3
Range: B:111-251
PDB: 3aqp
PDB Description: Probable SecDF protein-export membrane protein
UniProt: Q5SKE6
Species:

Structure of domain e3aqpB5

Domains in the same chain:

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e3aqpB1 B:2-37,B:263-435 Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
e3aqpB4 B:38-110,B:252-262 Alpha-beta plaits Ferredoxin domains in multidrug efflux transporter Multidrug efflux transporter AcrB pore domain
e3aqpB5 B:111-251 cradle loop barrel RIFT-related FMN-binding split barrel
e3aqpB3 B:436-472,B:559-726 Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
e3aqpB2 B:473-558 Alpha-beta plaits Ferredoxin domains in multidrug efflux transporter Multidrug efflux transporter AcrB pore domain

Domains in the same PDB:

e3aqpA1 A:2-37,A:263-435 Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
e3aqpA2 A:38-110,A:252-262 Alpha-beta plaits Ferredoxin domains in multidrug efflux transporter Multidrug efflux transporter AcrB pore domain
e3aqpA3 A:111-251 cradle loop barrel RIFT-related FMN-binding split barrel
e3aqpA4 A:436-472,A:559-726 Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
e3aqpA5 A:473-558 Alpha-beta plaits Ferredoxin domains in multidrug efflux transporter Multidrug efflux transporter AcrB pore domain
e3aqpB1 B:2-37,B:263-435 Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
e3aqpB4 B:38-110,B:252-262 Alpha-beta plaits Ferredoxin domains in multidrug efflux transporter Multidrug efflux transporter AcrB pore domain
e3aqpB5 B:111-251 cradle loop barrel RIFT-related FMN-binding split barrel
e3aqpB3 B:436-472,B:559-726 Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
e3aqpB2 B:473-558 Alpha-beta plaits Ferredoxin domains in multidrug efflux transporter Multidrug efflux transporter AcrB pore domain

Structural contacts of domain e3aqpB5 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3aqpA3 B:x,y,z->A:-Y,X,Z-1/4 RIFT-related Interaction Interface Pymol