Domain ID e3arcu1

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  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: SAM domain-like
  • F: PsbU
UID: 000417318
Type: Automatic domain
Parent: e2axtU1
Range: u:8-104
Ligands: GOL
PDB: 3arc
PDB Description:
Species:

Structure of domain e3arcu1

Domains in the same chain:

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e3arcu1 u:8-104 HhH/H2TH SAM/DNA-glycosylase SAM domain-like

Domains in the same PDB:

e3arca1 a:11-344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e3arcA1 A:11-344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e3arcb1 b:2-328,b:445-505 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e3arcb2 b:329-444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e3arcB1 B:2-328,B:445-505 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e3arcB2 B:329-444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e3arcc1 c:19-473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e3arcC1 C:23-473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e3arcd1 d:12-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e3arcD1 D:11-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e3arce1 e:4-84 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e3arcE1 E:4-84 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e3arcf1 f:14-45 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e3arcF1 F:12-45 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e3arch1 h:2-66 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e3arcH1 H:2-66 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e3arci1 i:1-38 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e3arcI1 I:1-38 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e3arcj1 j:1-40 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e3arcJ1 J:3-40 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e3arck1 k:10-46 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e3arcK1 K:10-46 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e3arcl1 l:1-37 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e3arcL1 L:1-37 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e3arcm1 m:1-34 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e3arcM1 M:1-34 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e3arco1 o:4-246 Outer membrane meander beta-barrels OMPA-like OMPA-like
e3arcO1 O:4-246 Outer membrane meander beta-barrels OMPA-like OMPA-like
e3arct1 t:1-30 Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT
e3arcT1 T:1-30 Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT
e3arcu1 u:8-104 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3arcU1 U:8-104 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3arcv1 v:1-137 Cytochrome c-like Cytochrome c Cytochrome c
e3arcV1 V:1-137 Cytochrome c-like Cytochrome c Cytochrome c
e3arcx1 x:2-40 Photosystem II PsbX protein Photosystem II PsbX protein Photosystem II PsbX protein
e3arcX1 X:2-40 Photosystem II PsbX protein Photosystem II PsbX protein Photosystem II PsbX protein
e3arcy1 y:18-46 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12
e3arcY1 Y:18-46 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12 Photosystem II reaction center protein ycf12
e3arcz1 z:1-62 PsbZ-like PsbZ-like PsbZ-like
e3arcZ1 Z:1-62 PsbZ-like PsbZ-like PsbZ-like

Structural contacts of domain e3arcu1 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3arcv1 u:X,Y,Z->v:x,y,z Cytochrome c Interaction Interface Pymol
e3arco1 u:x,y,z->o:X,Y,Z OMPA-like Interaction Interface Pymol
e3arcV1 u:-X,Y-1/2,-Z+3/2->V:x,y,z Cytochrome c Interaction Interface Pymol
e3arcb2 u:x,y,z->b:X,Y,Z Photosystem II antenna protein PsbB insertion domain Interaction Interface Pymol
e3arcc1 u:x,y,z->c:X,Y,Z Photosystem II antenna protein-like Interaction Interface Pymol
e3arcd1 u:x,y,z->d:X,Y,Z Bacterial photosystem II reaction centre L and M subunits-like Interaction Interface Pymol
e3arca1 u:x,y,z->a:X,Y,Z Bacterial photosystem II reaction centre L and M subunits-like Interaction Interface Pymol