- A: a/b three-layered sandwiches
- X: HAD domain-like
- H: HAD domain-related
- T: Toprim domain
- F: Toprim_2
| UID: | 001409570 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1nuiA3 |
| Range: | A:241-367 |
| PDB: | 3b39 |
| PDB Description: | DNA primase |
| UniProt: | P0ABS5 |
| Species: |
Structure of domain e3b39A3
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e3b39A3 of H-group "HAD domain-related":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3b39A2 | A:x,y,z->A:-X-1,-Y-1,Z | helical domain in DNA primase DnaG catalytic core | Interaction Interface Pymol |
| e3b39A3 | A:x,y,z->A:-X-1,-Y-1,Z | HAD domain-related | Interaction Interface Pymol |
| e3b39A2 | A:-X-1,-Y-1,Z->A:x,y,z | helical domain in DNA primase DnaG catalytic core | Interaction Interface Pymol |
| e3b39A3 | A:-X-1,-Y-1,Z->A:x,y,z | HAD domain-related | Interaction Interface Pymol |
| e3b39B3 | A:x,y,z->B:X-Y,X,Z-2/3 | N-terminal a+b domain in DNA primase core | Interaction Interface Pymol |
| e3b39B2 | A:X,Y,Z->B:x,y,z | HAD domain-related | Interaction Interface Pymol |
| e3b39B1 | A:X,Y,Z->B:x,y,z | helical domain in DNA primase DnaG catalytic core | Interaction Interface Pymol |
| e3b39B2 | A:x,y,z->B:X-Y,X,Z+1/3 | HAD domain-related | Interaction Interface Pymol |
