Domain ID e3b6bB1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Nucleoside diphosphate kinases
  • T: Nucleoside diphosphate kinases
  • F: NDK
UID: 000351304
Type: Automatic domain
Parent: e3bbbA1
Range: B:1-129
Ligands: DGI MG
PDB: 3b6b
PDB Description: NUCLEOSIDE DIPHOSPHATE KINASE
UniProt: Q5UQL3
Hsap BLAST neighbor: Q13232
Species: Acanthamoeba polyphaga mimivirus

Structure of domain e3b6bB1

Structural contacts of domain e3b6bB1 of H-group "Nucleoside diphosphate kinases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3b6bB1 B:x,y,z->B:-X+2,Y,-Z+1/2 Nucleoside diphosphate kinases Interaction Interface Pymol
e3b6bB1 B:-X+2,Y,-Z+1/2->B:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3b6bF1 B:X,Y,Z->F:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3b6bD1 B:X,Y,Z->D:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3b6bA1 B:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol
e3b6bE1 B:-X+3/2,Y-1/2,-Z+1/2->E:x,y,z Nucleoside diphosphate kinases Interaction Interface Pymol