ECOD: domain e3b82E12

Domain ID e3b82E12

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: EFG_IV

UID:	001208023
Type:	Automatic domain
Parent:	e2dy1A4
Range:	E:543-707,E:822-842
Ligands:	NAD
PDB:	3b82
PDB Description:	Elongation factor 2
UniProt:	P32324
Hsap BLAST neighbor:	P13639
Species:	Saccharomyces cerevisiae

Domain
In chain context
In PDB context

Structure of domain e3b82E12

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e3b82A13	A:2-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3b82A11	A:326-463	cradle loop barrel	RIFT-related	Alanine racemase-C
e3b82A14	A:464-542	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3b82A12	A:543-707,A:822-842	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e3b82A15	A:708-821	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3b82B1	B:399-605	ADP-ribosylation	ADP-ribosylation	ADP-ribosylation
e3b82C13	C:2-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3b82C11	C:326-463	cradle loop barrel	RIFT-related	Alanine racemase-C
e3b82C14	C:464-542	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3b82C12	C:543-707,C:822-842	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e3b82C15	C:708-821	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3b82D1	D:399-605	ADP-ribosylation	ADP-ribosylation	ADP-ribosylation
e3b82E13	E:2-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3b82E11	E:326-463	cradle loop barrel	RIFT-related	Alanine racemase-C
e3b82E14	E:464-542	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3b82E12	E:543-707,E:822-842	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e3b82E15	E:708-821	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3b82F1	F:399-605	ADP-ribosylation	ADP-ribosylation	ADP-ribosylation

Structural contacts of domain e3b82E12 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3b82F1	E:X,Y,Z->F:x,y,z	ADP-ribosylation	Interaction Interface Pymol
e3b82B1	E:x,y,z->B:-X,Y-1,-Z+1	ADP-ribosylation	Interaction Interface Pymol
e3b82D1	E:x,y,z->D:X-1/2,Y-3/2,Z	ADP-ribosylation	Interaction Interface Pymol
e3b82C12	E:x,y,z->C:-X,Y-1,-Z+1	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e3b82A11	E:x,y,z->A:X,Y-1,Z	RIFT-related	Interaction Interface Pymol