ECOD: domain e3b8hC12

Domain ID e3b8hC12

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: EFG_IV

UID:	001208033
Type:	Automatic domain
Parent:	e2dy1A4
Range:	C:543-707,C:822-842
Ligands:	NAD
PDB:	3b8h
PDB Description:	Elongation factor 2
UniProt:	P32324
Hsap BLAST neighbor:	P13639
Species:	Saccharomyces cerevisiae

Domain
In chain context
In PDB context

Structure of domain e3b8hC12

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e3b8hA13	A:2-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3b8hA11	A:326-463	cradle loop barrel	RIFT-related	Alanine racemase-C
e3b8hA14	A:464-542	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3b8hA12	A:543-707,A:822-842	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e3b8hA15	A:708-821	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3b8hB1	B:399-605	ADP-ribosylation	ADP-ribosylation	ADP-ribosylation
e3b8hC13	C:2-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3b8hC11	C:326-463	cradle loop barrel	RIFT-related	Alanine racemase-C
e3b8hC14	C:464-542	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3b8hC12	C:543-707,C:822-842	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e3b8hC15	C:708-821	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3b8hD1	D:399-605	ADP-ribosylation	ADP-ribosylation	ADP-ribosylation
e3b8hE13	E:2-325	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3b8hE11	E:326-463	cradle loop barrel	RIFT-related	Alanine racemase-C
e3b8hE14	E:464-542	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3b8hE12	E:543-707,E:822-842	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e3b8hE15	E:708-821	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e3b8hF1	F:399-605	ADP-ribosylation	ADP-ribosylation	ADP-ribosylation

Structural contacts of domain e3b8hC12 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3b8hD1	C:x,y,z->D:X,Y,Z	ADP-ribosylation	Interaction Interface Pymol
e3b8hD1	C:x,y,z->D:-X+1/2,Y-1/2,-Z+1	ADP-ribosylation	Interaction Interface Pymol
e3b8hB1	C:x,y,z->B:X,Y,Z	ADP-ribosylation	Interaction Interface Pymol
e3b8hE12	C:-X,Y-1,-Z+1->E:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol