| UID: | 000113976 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3bbdA1 |
| Range: | B:2-205 |
| Ligands: | GOL SAH |
| PDB: | 3bbd |
| PDB Description: | RIBOSOME BIOGENESIS PROTEIN NEP1-LIKE |
| UniProt: | Q57977 |
| Hsap BLAST neighbor: | Q92979 |
| Species: | Methanocaldococcus jannaschii |
Structure of domain e3bbdB1
Domains in the same chain:
| e3bbdB1 | B:2-205 | alpha/beta knot | alpha/beta knot | alpha/beta knot |
Domains in the same PDB:
| e3bbdA1 | A:2-205 | alpha/beta knot | alpha/beta knot | alpha/beta knot |
| e3bbdB1 | B:2-205 | alpha/beta knot | alpha/beta knot | alpha/beta knot |
Structural contacts of domain e3bbdB1 of H-group "alpha/beta knot":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3bbdA1 | B:x,y,z->A:X,Y,Z | alpha/beta knot | Interaction Interface Pymol |
| e3bbdA1 | B:x,y,z->A:X-1/2,-Y+3/2,-Z | alpha/beta knot | Interaction Interface Pymol |
| e3bbdA1 | B:-X+1/2,-Y+1,Z-1/2->A:x,y,z | alpha/beta knot | Interaction Interface Pymol |
| e3bbdA1 | B:x,y,z->A:-X+1,Y-1/2,-Z+1/2 | alpha/beta knot | Interaction Interface Pymol |
| e3bbdB1 | B:x,y,z->B:-X+1/2,-Y+1,Z-1/2 | alpha/beta knot | Interaction Interface Pymol |
| e3bbdB1 | B:-X+1/2,-Y+1,Z-1/2->B:x,y,z | alpha/beta knot | Interaction Interface Pymol |
