Domain ID e3bboV1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal proteins S24e, L23 and L15e
  • T: Ribosomal proteins S24e, L23 and L15e
  • F: Ribosomal_L23
UID: 000168031
Type: Automatic domain
Parent: e1vqoS1
Range: V:110-194
PDB: 3bbo
PDB Description:
Hsap BLAST neighbor: P62750
Species:

Structure of domain e3bboV1

Domains in the same chain:

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e3bboV1 V:110-194 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e

Domains in the same PDB:

e3bbo11 1:50-121 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e3bbo21 2:1-57 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3bbo41 4:104-140 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3bbo51 5:91-152 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3bbo61 6:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3bboD4 D:116-182,D:274-342 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e3bboD3 D:183-273 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e3bboE2 E:4-121 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3bboE1 E:122-269 SH3 SH3 SH3
e3bboG1 G:51-261 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3bboH1 H:18-192 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3bboI1 I:42-119 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3bboI2 I:120-223 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3bboJ2 J:50-105 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3bboJ1 J:106-197 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e3bboK2 K:67-134 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3bboK1 K:135-211 HTH HTH Ribosomal protein L11, C-terminal domain
e3bboL1 L:112-236 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3bboM1 M:1-121 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3bboP1 P:90-205 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3bboT1 T:123-226 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3bboU1 U:30-151 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3bboV1 V:110-194 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3bboW1 W:63-172 SH3 SH3 SH3
e3bboX1 X:59-144 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3bboY1 Y:76-151 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3bboZ1 Z:62-126 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)

Structural contacts of domain e3bboV1 of H-group "Ribosomal proteins S24e, L23 and L15e":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3bboZ1 V:x,y,z->Z:X,Y,Z Ribosomal protein L29 (L29p) Interaction Interface Pymol