Domain ID e3bbx21

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  • A: extended segments
  • X: 50S ribosomal protein L34
  • H: 50S ribosomal protein L34
  • T: 50S ribosomal protein L34
  • F: Ribosomal_L34
UID: 000350289
Type: Automatic domain
Parent: e2wdi71
Range: 2:1-46
Ligands: MG
PDB: 3bbx
PDB Description: 50S ribosomal protein L34
UniProt: P0A7P5
Species: Escherichia coli

Structure of domain e3bbx21

Domains in the same chain:

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e3bbx21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34

Domains in the same PDB:

e3bbx01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3bbx11 1:1-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3bbx21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3bbx31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3bbx41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3bbxC3 C:3-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3bbxC4 C:125-269 SH3 SH3 SH3
e3bbxD1 D:1-209 cradle loop barrel RIFT-related Alanine racemase-C
e3bbxE1 E:1-198 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3bbxF1 F:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3bbxG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3bbxG1 G:82-170 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3bbxH2 H:1-52 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3bbxH3 H:56-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e3bbxJ1 J:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3bbxK1 K:2-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3bbxL1 L:1-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e3bbxM1 M:1-136 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e3bbxN1 N:14-117 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3bbxO1 O:1-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3bbxP1 P:1-114 SH3 SH3 SH3
e3bbxQ1 Q:1-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e3bbxR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3bbxS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3bbxT1 T:6-99 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3bbxU2 U:1-102 SH3 SH3 SH3
e3bbxV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3bbxW1 W:1-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3bbxX2 X:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3bbxY1 Y:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3bbxZ1 Z:1-70 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p

Structural contacts of domain e3bbx21 of H-group "50S ribosomal protein L34":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3bbxT1 2:X,Y,Z->T:x,y,z Ribosomal proteins S24e, L23 and L15e Interaction Interface Pymol