Domain ID e3bdjA2

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  • A: a+b complex topology
  • X: FAD-binding domain-like
  • H: FAD-binding domain
  • T: FAD-binding domain
  • F: FAD_binding_5
UID: 000352486
Type: Automatic domain
Parent: e1n62C2
Range: A:193-414
Ligands: FAD
PDB: 3bdj
PDB Description: Xanthine dehydrogenase/oxidase
UniProt: P80457
Hsap BLAST neighbor: P47989
Species: Bos taurus

Structure of domain e3bdjA2

Domains in the same chain:

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e3bdjA5 A:3-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e3bdjA6 A:93-164 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e3bdjA2 A:193-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e3bdjA14 A:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e3bdjA13 A:531-688 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3bdjA1 A:695-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3bdjA3 A:955-1332 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Domains in the same PDB:

e3bdjA5 A:3-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e3bdjA6 A:93-164 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e3bdjA2 A:193-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e3bdjA14 A:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e3bdjA13 A:531-688 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3bdjA1 A:695-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3bdjA3 A:955-1332 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3bdjB5 B:3-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e3bdjB6 B:93-164 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e3bdjB2 B:193-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e3bdjB14 B:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e3bdjB13 B:531-688 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3bdjB4 B:695-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3bdjB3 B:955-1332 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Structural contacts of domain e3bdjA2 of H-group "FAD-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3bdjA13 A:x,y,z->A:-X+3/2,Y-1/2,-Z+2 alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e3bdjA14 A:x,y,z->A:-X+3/2,Y-1/2,-Z+2 SufE/NifU Interaction Interface Pymol
e3bdjB3 A:X-1/2,Y-1/2,Z->B:x,y,z MocoBD/DmpA-related Interaction Interface Pymol
e3bdjB13 A:-X+3/2,Y-1/2,-Z+2->B:x,y,z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol