Domain ID e3bg3D7

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: HMGL-like
UID: 001685436
Type: Automatic domain
Parent: e1rqbA3
Range: D:494-862
Ligands: MN PYR
DrugDomain: DB00119
PDB: 3bg3
PDB Description: Pyruvate carboxylase, mitochondrial
UniProt: P11498
Hsap BLAST neighbor: P11498
Species: Homo sapiens

Structure of domain e3bg3D7

Domains in the same chain:

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e3bg3D7 D:494-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e3bg3D1 D:863-984 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3bg3D6 D:986-1026 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3bg3D5 D:1027-1097 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e3bg3D4 D:1102-1178 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif

Domains in the same PDB:

e3bg3A3 A:494-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e3bg3A4 A:863-984 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3bg3A2 A:985-1026 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3bg3A5 A:1027-1097 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e3bg3A1 A:1102-1178 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e3bg3B10 B:494-519,B:1027-1097 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e3bg3B8 B:520-863 TIM beta/alpha-barrel TIM barrels TIM barrels
e3bg3B9 B:864-985 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3bg3B7 B:986-1026 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3bg3C10 C:494-519,C:1027-1097 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e3bg3C8 C:520-863 TIM beta/alpha-barrel TIM barrels TIM barrels
e3bg3C9 C:864-985 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3bg3C7 C:986-1026 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3bg3D7 D:494-862 TIM beta/alpha-barrel TIM barrels TIM barrels
e3bg3D1 D:863-984 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3bg3D6 D:986-1026 RuvA-C post-HMGL domain-like post-HMGL domain-like
e3bg3D5 D:1027-1097 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related a+b domain in pyruvate carboxylase
e3bg3D4 D:1102-1178 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif

Structural contacts of domain e3bg3D7 of H-group "TIM barrels":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3bg3A4 D:x,y,z->A:X,Y,Z post-HMGL domain-like Interaction Interface Pymol
e3bg3A3 D:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e3bg3C10 D:x,y,z->C:-X,Y-1/2,-Z-1 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Interaction Interface Pymol
e3bg3C8 D:x,y,z->C:-X+1,Y-1/2,-Z TIM barrels Interaction Interface Pymol
e3bg3A5 D:x,y,z->A:-X,Y-1/2,-Z-1 Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related Interaction Interface Pymol