Domain ID e3bgaB4

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_2_C
UID: 000332585
Type: Automatic domain
Parent: e1jz8A5
Range: B:357-636
Ligands: CL MG NA
PDB: 3bga
PDB Description: Beta-galactosidase
UniProt: Q8A799
Hsap BLAST neighbor: P08236
Species:

Structure of domain e3bgaB4

Domains in the same chain:

Download Pymol

e3bgaB1 B:23-243 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3bgaB2 B:244-356 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgaB4 B:357-636 TIM beta/alpha-barrel TIM barrels TIM barrels
e3bgaB5 B:634-742 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgaB3 B:743-1022 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e3bgaA8 A:27-245 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3bgaA10 A:246-356 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgaA6 A:357-638 TIM beta/alpha-barrel TIM barrels TIM barrels
e3bgaA9 A:639-747 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgaA7 A:748-1029 Glycosyl hydrolase domain-like supersandwich supersandwich
e3bgaB1 B:23-243 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3bgaB2 B:244-356 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgaB4 B:357-636 TIM beta/alpha-barrel TIM barrels TIM barrels
e3bgaB5 B:634-742 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3bgaB3 B:743-1022 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e3bgaB4 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3bgaA8 B:x,y,z->A:X,Y,Z Galactose-binding domain-like Interaction Interface Pymol
e3bgaA10 B:x,y,z->A:X-1,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3bgaA6 B:x,y,z->A:X-1,Y,Z TIM barrels Interaction Interface Pymol