Domain ID e3bgjA1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: OMPdecase
UID: 000352288
Type: Automatic domain
Parent: e1km4A1
Range: A:34-290
Ligands: U5P
PDB: 3bgj
PDB Description: URIDINE 5'-MONOPHOSPHATE SYNTHASE
UniProt: P11172
Hsap BLAST neighbor: P11172
Species: Homo sapiens

Structure of domain e3bgjA1

Structural contacts of domain e3bgjA1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3bgjB1 A:X,Y,Z->B:x,y,z TIM barrels Interaction Interface Pymol
e3bgjB1 A:-X,Y-1/2,-Z->B:x,y,z TIM barrels Interaction Interface Pymol
e3bgjB1 A:x,y,z->B:-X,Y-1/2,-Z TIM barrels Interaction Interface Pymol
e3bgjA1 A:x,y,z->A:-X+1,Y-1/2,-Z TIM barrels Interaction Interface Pymol
e3bgjA1 A:-X+1,Y-1/2,-Z->A:x,y,z TIM barrels Interaction Interface Pymol
e3bgjB1 A:X-1,Y,Z->B:x,y,z TIM barrels Interaction Interface Pymol
e3bgjB1 A:x,y,z->B:X,Y,Z-1 TIM barrels Interaction Interface Pymol