Domain ID e3bgsA1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000105837
Type: Automatic domain
Parent: e3pnpA1
Range: A:1-284
Ligands: DIH PO4
DrugDomain: DB03551
PDB: 3bgs
PDB Description: purine nucleoside phosphorylase
UniProt: P00491
Hsap BLAST neighbor: P00491
Species: Homo sapiens

Structure of domain e3bgsA1

Structural contacts of domain e3bgsA1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3bgsA1 A:x,y,z->A:-Y,X-Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3bgsA1 A:-Y,X-Y,Z->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3bgsA1 A:x,y,z->A:X-Y+1/3,-Y+2/3,-Z+2/3 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3bgsA1 A:X-Y+1/3,-Y+2/3,-Z+2/3->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3bgsA1 A:x,y,z->A:Y,X,-Z+1 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3bgsA1 A:Y,X,-Z+1->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3bgsA1 A:x,y,z->A:-X,-X+Y,-Z+1 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e3bgsA1 A:-X,-X+Y,-Z+1->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol