ECOD: domain e3bjiA2

Domain ID e3bjiA2

A: few secondary structure elements
X: RING/U-box-like
H: RING/U-box-like
T: Cysteine-rich domain
F: C1_1

UID:	000168360
Type:	Automatic domain
Parent:	e1ptqA1
Range:	A:509-565
Ligands:	ZN
PDB:	3bji
PDB Description:	Proto-oncogene vav
UniProt:	P15498
Hsap BLAST neighbor:	P15498
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3bjiA2

Domains in the same chain:

Download Pymol

e3bjiA3	A:189-378	DH domain-like	DBL homology domain (DH-domain)	DBL homology domain (DH-domain)
e3bjiA4	A:379-508	PH domain-like	PH domain-like	PH domain-like
e3bjiA2	A:509-565	RING/U-box-like	RING/U-box-like	Cysteine-rich domain

Domains in the same PDB:

e3bjiA3	A:189-378	DH domain-like	DBL homology domain (DH-domain)	DBL homology domain (DH-domain)
e3bjiA4	A:379-508	PH domain-like	PH domain-like	PH domain-like
e3bjiA2	A:509-565	RING/U-box-like	RING/U-box-like	Cysteine-rich domain
e3bjiB2	B:189-378	DH domain-like	DBL homology domain (DH-domain)	DBL homology domain (DH-domain)
e3bjiB6	B:379-508	PH domain-like	PH domain-like	PH domain-like
e3bjiB7	B:509-566	RING/U-box-like	RING/U-box-like	Cysteine-rich domain
e3bjiC1	C:1-177	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3bjiD1	D:3-176	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e3bjiA2 of H-group "RING/U-box-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3bjiB7	A:x,y,z->B:-X+1,Y-1/2,-Z+2	RING/U-box-like	Interaction Interface Pymol
e3bjiB2	A:x,y,z->B:-X+1,Y-1/2,-Z+2	DBL homology domain (DH-domain)	Interaction Interface Pymol
e3bjiC1	A:-X+1,Y-1/2,-Z+2->C:x,y,z	P-loop domains-related	Interaction Interface Pymol