ECOD: domain e3bjuD2

Domain ID e3bjuD2

A: a+b three layers
X: Class II aaRS and biotin synthetases
H: Class II aaRS and biotin synthetases
T: Class II aaRS and biotin synthetases
F: tRNA-synt_2

UID:	000335471
Type:	Automatic domain
Parent:	e1e1oA2
Range:	D:221-575
Ligands:	ATP CA LYS
PDB:	3bju
PDB Description:	Lysyl-tRNA synthetase
UniProt:	Q15046
Hsap BLAST neighbor:	Q15046
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3bjuD2

Domains in the same chain:

Download Pymol

e3bjuD1	D:71-214	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3bjuD2	D:221-575	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases

Domains in the same PDB:

e3bjuA4	A:70-215	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3bjuA3	A:216-576	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3bjuB6	B:72-214	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3bjuB5	B:223-574	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3bjuC4	C:72-215	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3bjuC3	C:216-575	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3bjuD1	D:71-214	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3bjuD2	D:221-575	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases

Structural contacts of domain e3bjuD2 of H-group "Class II aaRS and biotin synthetases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3bjuC4	D:x,y,z->C:X,Y,Z	Nucleic acid-binding proteins	Interaction Interface Pymol
e3bjuC3	D:x,y,z->C:X,Y,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3bjuB6	D:x,y,z->B:X,Y,Z	Nucleic acid-binding proteins	Interaction Interface Pymol
e3bjuA3	D:X,Y,Z-1->A:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol