ECOD: domain e3bk2A1

Domain ID e3bk2A1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: RNase_J_b_CASP

UID:	001710391
Type:	Automatic domain
Parent:	e3t3oA2
Range:	A:210-374
Ligands:	GOL U5P
PDB:	3bk2
PDB Description:	METAL DEPENDENT HYDROLASE
UniProt:	Q72JJ7
Species:

Domain
In chain context
In PDB context

Structure of domain e3bk2A1

Domains in the same chain:

Download Pymol

e3bk2A2	A:7-209,A:375-458	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase
e3bk2A1	A:210-374	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3bk2A3	A:459-555	Flagellar protein FlgA N-terminal domain-like	RNase J C-terminal domain	RNase J C-terminal domain

Domains in the same PDB:

e3bk2A2	A:7-209,A:375-458	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase	Metallo-hydrolase/oxidoreductase
e3bk2A1	A:210-374	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3bk2A3	A:459-555	Flagellar protein FlgA N-terminal domain-like	RNase J C-terminal domain	RNase J C-terminal domain

Structural contacts of domain e3bk2A1 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3bk2A2	A:x,y,z->A:-X+1/2,-Y+1/2,Z	Metallo-hydrolase/oxidoreductase	Interaction Interface Pymol
e3bk2A1	A:x,y,z->A:-X+1/2,-Y+1/2,Z	P-loop domains-related	Interaction Interface Pymol
e3bk2A2	A:-X+1/2,-Y+1/2,Z->A:x,y,z	Metallo-hydrolase/oxidoreductase	Interaction Interface Pymol
e3bk2A1	A:-X+1/2,-Y+1/2,Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e3bk2A2	A:x,y,z->A:X,-Y+1/2,-Z+1/2	Metallo-hydrolase/oxidoreductase	Interaction Interface Pymol
e3bk2A1	A:x,y,z->A:X,-Y+1/2,-Z+1/2	P-loop domains-related	Interaction Interface Pymol
e3bk2A2	A:X,-Y+1/2,-Z+1/2->A:x,y,z	Metallo-hydrolase/oxidoreductase	Interaction Interface Pymol
e3bk2A1	A:X,-Y+1/2,-Z+1/2->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e3bk2A1	A:x,y,z->A:-X,-Y+1,Z	P-loop domains-related	Interaction Interface Pymol
e3bk2A2	A:x,y,z->A:-X,-Y+1,Z	Metallo-hydrolase/oxidoreductase	Interaction Interface Pymol
e3bk2A2	A:-X,-Y+1,Z->A:x,y,z	Metallo-hydrolase/oxidoreductase	Interaction Interface Pymol
e3bk2A1	A:-X,-Y+1,Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e3bk2A2	A:X-1/2,Y-1/2,Z->A:x,y,z	Metallo-hydrolase/oxidoreductase	Interaction Interface Pymol