| UID: | 000091743 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1sg1X3 |
| Range: | D:3-56 |
| Ligands: | NAG |
| PDB: | 3buk |
| PDB Description: | Tumor necrosis factor receptor superfamily member 16 |
| UniProt: | P07174 |
| Hsap BLAST neighbor: | P08138 |
| Species: |
Structure of domain e3bukD1
Domains in the same chain:
| e3bukD1 | D:3-56 | EGF-like | EGF-related | TNF receptor-like |
| e3bukD2 | D:57-95 | EGF-like | EGF-related | TNF receptor-like |
| e3bukD3 | D:96-137 | EGF-like | EGF-related | TNF receptor-like |
| e3bukD4 | D:138-161 | EGF-like | EGF-related | TNF receptor-like |
Domains in the same PDB:
| e3bukA1 | A:9-115 | Cystine-knot cytokines | Cystine-knot cytokines | Cystine-knot cytokines |
| e3bukB1 | B:9-115 | Cystine-knot cytokines | Cystine-knot cytokines | Cystine-knot cytokines |
| e3bukC1 | C:3-56 | EGF-like | EGF-related | TNF receptor-like |
| e3bukC2 | C:57-95 | EGF-like | EGF-related | TNF receptor-like |
| e3bukC3 | C:96-137 | EGF-like | EGF-related | TNF receptor-like |
| e3bukC4 | C:138-161 | EGF-like | EGF-related | TNF receptor-like |
| e3bukD1 | D:3-56 | EGF-like | EGF-related | TNF receptor-like |
| e3bukD2 | D:57-95 | EGF-like | EGF-related | TNF receptor-like |
| e3bukD3 | D:96-137 | EGF-like | EGF-related | TNF receptor-like |
| e3bukD4 | D:138-161 | EGF-like | EGF-related | TNF receptor-like |
Structural contacts of domain e3bukD1 of H-group "EGF-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3bukA1 | D:x,y,z->A:X,Y,Z | Cystine-knot cytokines | Interaction Interface Pymol |
| e3bukB1 | D:x,y,z->B:X,Y,Z | Cystine-knot cytokines | Interaction Interface Pymol |
| e3bukD3 | D:-Y,X-Y,Z->D:x,y,z | EGF-related | Interaction Interface Pymol |
| e3bukD4 | D:-Y,X-Y,Z->D:x,y,z | EGF-related | Interaction Interface Pymol |
| e3bukA1 | D:x,y,z->A:-Y+2/3,X-Y+1/3,Z+1/3 | Cystine-knot cytokines | Interaction Interface Pymol |
