Domain ID e3c5zC2

Download files:
  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_II_alpha
UID: 000075349
Type: Automatic domain
Parent: e1hdmA2
Range: C:1-82
PDB: 3c5z
PDB Description: H-2 class II histocompatibility antigen, A-B alpha chain
UniProt: P14434
Hsap BLAST neighbor: P01909
Species: Mus musculus

Structure of domain e3c5zC2

Domains in the same chain:

e3c5zC2 C:1-82 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3c5zC1 C:83-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3c5zA1 A:1-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3c5zA2 A:112-202 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3c5zB4 B:1-114 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3c5zB3 B:115-240 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3c5zC2 C:1-82 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3c5zC1 C:83-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3c5zD2 D:1-121 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3c5zD1 D:122-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3c5zE1 E:1-111 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3c5zE2 E:112-201 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3c5zF4 F:1-114 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3c5zF3 F:115-240 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3c5zG2 G:1-82 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3c5zG1 G:83-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3c5zH2 H:1-121 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3c5zH1 H:122-217 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3c5zC2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1hdmA2 C:X,Y,Z->D:x,y,z MHC antigen-recognition domain Interaction Interface Pymol
e3c5zD1 C:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3c5zB4 C:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3c5zA1 C:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3c5zH1 C:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3c5zC1 C:X-1,Y,Z->C:x,y,z Immunoglobulin-related Interaction Interface Pymol