Domain ID e3c6kB5

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  • A: a+b two layers
  • X: TBP-like
  • H: S-adenosylmethionine decarboxylase-related
  • T: Bacterial S-adenosylmethionine decarboxylase
  • F: SpmSyn_N
UID: 001234337
Type: Automatic domain
Parent: e3c6mA1
Range: B:6-104
PDB: 3c6k
PDB Description: SPERMINE SYNTHASE
UniProt: P52788
Hsap BLAST neighbor: P52788
Species: Homo sapiens

Structure of domain e3c6kB5

Domains in the same chain:

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e3c6kB5 B:6-104 TBP-like S-adenosylmethionine decarboxylase-related Bacterial S-adenosylmethionine decarboxylase
e3c6kB3 B:108-175 Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain
e3c6kB2 B:176-368 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases

Domains in the same PDB:

e3c6kA5 A:5-104 TBP-like S-adenosylmethionine decarboxylase-related Bacterial S-adenosylmethionine decarboxylase
e3c6kA3 A:108-175 Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain
e3c6kA2 A:176-367 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3c6kB5 B:6-104 TBP-like S-adenosylmethionine decarboxylase-related Bacterial S-adenosylmethionine decarboxylase
e3c6kB3 B:108-175 Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain
e3c6kB2 B:176-368 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3c6kC5 C:5-104 TBP-like S-adenosylmethionine decarboxylase-related Bacterial S-adenosylmethionine decarboxylase
e3c6kC3 C:108-175 Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain
e3c6kC4 C:176-368 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3c6kD5 D:5-104 TBP-like S-adenosylmethionine decarboxylase-related Bacterial S-adenosylmethionine decarboxylase
e3c6kD3 D:108-175 Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain Spermidine synthase tetramerisation domain
e3c6kD2 D:176-367 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases

Structural contacts of domain e3c6kB5 of H-group "S-adenosylmethionine decarboxylase-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3c6mA1 B:x,y,z->A:X,Y,Z S-adenosylmethionine decarboxylase-related Interaction Interface Pymol
e3c6kA5 B:x,y,z->A:X,Y,Z S-adenosylmethionine decarboxylase-related Interaction Interface Pymol
e3c6kD5 B:X-1,Y-1,Z-1->D:x,y,z S-adenosylmethionine decarboxylase-related Interaction Interface Pymol
e3c6kA5 B:X-1,Y,Z->A:x,y,z S-adenosylmethionine decarboxylase-related Interaction Interface Pymol
e3c6kD5 B:X,Y-1,Z-1->D:x,y,z S-adenosylmethionine decarboxylase-related Interaction Interface Pymol