Domain ID e3cf1B4

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  • A: a+b two layers
  • X: Cdc48 domain 2-like
  • H: Cdc48 domain 2-like
  • T: Cdc48 domain 2-like
  • F: CDC48_2
UID: 000340310
Type: Automatic domain
Parent: e1cr5A2
Range: B:107-200
PDB: 3cf1
PDB Description: Transitional endoplasmic reticulum ATPase
UniProt: Q01853
Hsap BLAST neighbor: P55072
Species: Mus musculus

Structure of domain e3cf1B4

Domains in the same chain:

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e3cf1B1 B:21-106 cradle loop barrel RIFT-related double psi
e3cf1B4 B:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf1B6 B:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf1B20 B:372-465 Histone-like Histone-related AAA+ ATPase lid domain
e3cf1B19 B:466-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf1B21 B:649-707,B:728-763 Histone-like Histone-related AAA+ ATPase lid domain

Domains in the same PDB:

e3cf1A5 A:21-106 cradle loop barrel RIFT-related double psi
e3cf1A3 A:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf1A8 A:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf1A9 A:372-466 Histone-like Histone-related AAA+ ATPase lid domain
e3cf1A7 A:467-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf1A10 A:649-707,A:728-763 Histone-like Histone-related AAA+ ATPase lid domain
e3cf1B1 B:21-106 cradle loop barrel RIFT-related double psi
e3cf1B4 B:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf1B6 B:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf1B20 B:372-465 Histone-like Histone-related AAA+ ATPase lid domain
e3cf1B19 B:466-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf1B21 B:649-707,B:728-763 Histone-like Histone-related AAA+ ATPase lid domain
e3cf1C1 C:21-106 cradle loop barrel RIFT-related double psi
e3cf1C4 C:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf1C6 C:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf1C20 C:372-466 Histone-like Histone-related AAA+ ATPase lid domain
e3cf1C19 C:467-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf1C21 C:649-707,C:728-763 Histone-like Histone-related AAA+ ATPase lid domain

Structural contacts of domain e3cf1B4 of H-group "Cdc48 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3cf1A8 B:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3cf1A9 B:X-1/2,-Y+3/2,-Z+3/2->A:x,y,z Histone-related Interaction Interface Pymol