Domain ID e3cf2D8

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: double psi
  • F: CDC48_N
UID: 001390910
Type: Automatic domain
Parent: e1qcsA1
Range: D:21-107
PDB: 3cf2
PDB Description: Transitional endoplasmic reticulum ATPase
UniProt: Q01853
Hsap BLAST neighbor: P55072
Species: Mus musculus

Structure of domain e3cf2D8

Domains in the same chain:

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e3cf2D8 D:21-107 cradle loop barrel RIFT-related double psi
e3cf2D4 D:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf2D3 D:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf2D7 D:372-466 Histone-like Histone-related AAA+ ATPase lid domain
e3cf2D5 D:463-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf2D6 D:649-704,D:728-759 Histone-like Histone-related AAA+ ATPase lid domain

Domains in the same PDB:

e3cf2A8 A:21-107 cradle loop barrel RIFT-related double psi
e3cf2A4 A:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf2A3 A:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf2A7 A:372-466 Histone-like Histone-related AAA+ ATPase lid domain
e3cf2A5 A:463-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf2A6 A:649-704,A:728-759 Histone-like Histone-related AAA+ ATPase lid domain
e3cf2B8 B:21-107 cradle loop barrel RIFT-related double psi
e3cf2B4 B:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf2B3 B:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf2B7 B:372-466 Histone-like Histone-related AAA+ ATPase lid domain
e3cf2B5 B:463-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf2B6 B:649-704,B:728-759 Histone-like Histone-related AAA+ ATPase lid domain
e3cf2C8 C:21-107 cradle loop barrel RIFT-related double psi
e3cf2C4 C:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf2C3 C:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf2C7 C:372-466 Histone-like Histone-related AAA+ ATPase lid domain
e3cf2C5 C:463-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf2C6 C:649-704,C:728-759 Histone-like Histone-related AAA+ ATPase lid domain
e3cf2D8 D:21-107 cradle loop barrel RIFT-related double psi
e3cf2D4 D:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf2D3 D:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf2D7 D:372-466 Histone-like Histone-related AAA+ ATPase lid domain
e3cf2D5 D:463-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf2D6 D:649-704,D:728-759 Histone-like Histone-related AAA+ ATPase lid domain

Structural contacts of domain e3cf2D8 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3cf2C7 D:x,y,z->C:X,Y,Z Histone-related Interaction Interface Pymol
e3cf2D4 D:-Y+2,X-Y+2,Z->D:x,y,z Cdc48 domain 2-like Interaction Interface Pymol
e3cf2B4 D:-Y+2,X-Y,Z-1->B:x,y,z Cdc48 domain 2-like Interaction Interface Pymol