Domain ID e3cf3A4

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  • A: a+b two layers
  • X: Cdc48 domain 2-like
  • H: Cdc48 domain 2-like
  • T: Cdc48 domain 2-like
  • F: CDC48_2
UID: 000340322
Type: Automatic domain
Parent: e1cr5A2
Range: A:107-200
PDB: 3cf3
PDB Description: Transitional endoplasmic reticulum ATPase
UniProt: Q01853
Hsap BLAST neighbor: P55072
Species: Mus musculus

Structure of domain e3cf3A4

Domains in the same chain:

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e3cf3A1 A:21-106 cradle loop barrel RIFT-related double psi
e3cf3A4 A:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf3A6 A:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf3A20 A:372-465 Histone-like Histone-related AAA+ ATPase lid domain
e3cf3A19 A:466-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf3A21 A:649-707,A:728-763 Histone-like Histone-related AAA+ ATPase lid domain

Domains in the same PDB:

e3cf3A1 A:21-106 cradle loop barrel RIFT-related double psi
e3cf3A4 A:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf3A6 A:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf3A20 A:372-465 Histone-like Histone-related AAA+ ATPase lid domain
e3cf3A19 A:466-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf3A21 A:649-707,A:728-763 Histone-like Histone-related AAA+ ATPase lid domain
e3cf3B1 B:21-106 cradle loop barrel RIFT-related double psi
e3cf3B4 B:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf3B6 B:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf3B20 B:372-466 Histone-like Histone-related AAA+ ATPase lid domain
e3cf3B19 B:467-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf3B21 B:649-707,B:728-763 Histone-like Histone-related AAA+ ATPase lid domain
e3cf3C1 C:21-106 cradle loop barrel RIFT-related double psi
e3cf3C4 C:107-200 Cdc48 domain 2-like Cdc48 domain 2-like Cdc48 domain 2-like
e3cf3C6 C:201-371 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf3C20 C:372-465 Histone-like Histone-related AAA+ ATPase lid domain
e3cf3C19 C:466-648 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3cf3C21 C:649-707,C:728-763 Histone-like Histone-related AAA+ ATPase lid domain

Structural contacts of domain e3cf3A4 of H-group "Cdc48 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3cf3C6 A:-X+1,-Y+1,Z->C:x,y,z P-loop domains-related Interaction Interface Pymol
e3cf3C4 A:-X+3/2,Y-1/2,-Z+3/2->C:x,y,z Cdc48 domain 2-like Interaction Interface Pymol