ECOD: domain e3ckyD2

Domain ID e3ckyD2

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: NAD(P)-binding Rossmann-fold domains
F: NAD_binding_2

UID:	001380926
Type:	Automatic domain
Parent:	e2pgdA2
Range:	D:55-165
PDB:	3cky
PDB Description:	2-hydroxymethyl glutarate dehydrogenase
UniProt:	Q0QLF5
Hsap BLAST neighbor:	P31937
Species:

Domain
In chain context
In PDB context

Structure of domain e3ckyD2

Domains in the same chain:

Download Pymol

e3ckyD2	D:55-165	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3ckyD3	D:166-300	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like

Domains in the same PDB:

e3ckyA2	A:4-160	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3ckyA3	A:166-300	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like
e3ckyB2	B:4-160	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3ckyB3	B:166-299	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like
e3ckyC2	C:5-160	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3ckyC1	C:166-300	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like
e3ckyD2	D:55-165	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3ckyD3	D:166-300	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like

Structural contacts of domain e3ckyD2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3ckyA3	D:x,y,z->A:X,Y,Z	6-phosphogluconate dehydrogenase C-terminal domain-like	Interaction Interface Pymol