| UID: | 000355245 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1xeoA1 |
| Range: | B:-8-187 |
| Ligands: | FE MLI NA |
| PDB: | 3cmd |
| PDB Description: | PEPTIDE DEFORMYLASE |
| UniProt: | Q842S4 |
| Hsap BLAST neighbor: | Q9HBH1 |
| Species: | Enterococcus faecium |
Structure of domain e3cmdB1
Domains in the same chain:
| e3cmdB1 | B:-8-187 | Peptide deformylase | Peptide deformylase | Peptide deformylase |
Domains in the same PDB:
| e3cmdA1 | A:-6-187 | Peptide deformylase | Peptide deformylase | Peptide deformylase |
| e3cmdB1 | B:-8-187 | Peptide deformylase | Peptide deformylase | Peptide deformylase |
Structural contacts of domain e3cmdB1 of H-group "Peptide deformylase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3cmdA1 | B:x,y,z->A:X,Y,Z | Peptide deformylase | Interaction Interface Pymol |
| e3cmdA1 | B:x,y,z->A:X-Y,-Y+1,-Z+1 | Peptide deformylase | Interaction Interface Pymol |
| e3cmdB1 | B:x,y,z->B:-X,-Y+1,Z | Peptide deformylase | Interaction Interface Pymol |
| e3cmdB1 | B:-X,-Y+1,Z->B:x,y,z | Peptide deformylase | Interaction Interface Pymol |
| e3cmdA1 | B:-Y+1,X-Y+1,Z+1/3->A:x,y,z | Peptide deformylase | Interaction Interface Pymol |
| e3cmdA1 | B:x,y,z->A:-X+Y,Y,-Z+1 | Peptide deformylase | Interaction Interface Pymol |
| e3cmdA1 | B:x,y,z->A:-X,-Y+1,Z | Peptide deformylase | Interaction Interface Pymol |
