| UID: | 000185134 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:359-562 |
| Ligands: | NA PO4 |
| PDB: | 3cpe |
| PDB Description: | DNA packaging protein Gp17 |
| UniProt: | P17312 |
| Species: |
Structure of domain e3cpeA2
Domains in the same chain:
| e3cpeA1 | A:10-358 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e3cpeA2 | A:359-562 | Ribonuclease H-like | Ribonuclease H-like | Ribonuclease H-like |
Domains in the same PDB:
| e3cpeA1 | A:10-358 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e3cpeA2 | A:359-562 | Ribonuclease H-like | Ribonuclease H-like | Ribonuclease H-like |
Structural contacts of domain e3cpeA2 of H-group "Ribonuclease H-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3cpeA2 | A:x,y,z->A:-X,-Y-1,Z | Ribonuclease H-like | Interaction Interface Pymol |
| e3cpeA1 | A:x,y,z->A:-X,-Y-1,Z | P-loop domains-related | Interaction Interface Pymol |
| e3cpeA2 | A:-X,-Y-1,Z->A:x,y,z | Ribonuclease H-like | Interaction Interface Pymol |
| e3cpeA1 | A:-X,-Y-1,Z->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e3cpeA1 | A:x,y,z->A:-X+Y+1,Y,-Z | P-loop domains-related | Interaction Interface Pymol |
| e3cpeA1 | A:-X+Y+1,Y,-Z->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e3cpeA1 | A:x,y,z->A:-Y,X-Y-1,Z-1/3 | P-loop domains-related | Interaction Interface Pymol |
| e3cpeA1 | A:x,y,z->A:X-Y-1,-Y-1,-Z | P-loop domains-related | Interaction Interface Pymol |
