Domain ID e3cq8A3

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: DNA_pol_B
UID: 000066010
Type: Automatic domain
Parent: e1tgoA4
Range: A:376-467,A:574-731
Ligands: CA GOL NA TTP
PDB: 3cq8
PDB Description: DNA polymerase
UniProt: Q38087
Species: Enterobacteria phage RB69

Structure of domain e3cq8A3

Structural contacts of domain e3cq8A3 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3cq8A4 A:-X,Y-1/2,-Z+1/2->A:x,y,z Ribonuclease H-like Interaction Interface Pymol
e3cq8A1 A:x,y,z->A:X-1/2,-Y+1/2,-Z "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e3cq8A2 A:X-1/2,-Y+1/2,-Z->A:x,y,z "thumb" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e3cq8A4 A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 Ribonuclease H-like Interaction Interface Pymol