Domain ID e3cupB1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 001307595
Type: Automatic domain
Parent: e1k5nB1
Range: B:106-188
Ligands: EPE
PDB: 3cup
PDB Description: MHC class II H2-IA-beta chain linked to GAD221-235 peptide
UniProt: Q31135
Hsap BLAST neighbor: P01920
Species: Mus musculus

Structure of domain e3cupB1

Structural contacts of domain e3cupB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3cupA2 B:x,y,z->A:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e3cupA1 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3cupA1 B:-Y,-X+1,-Z+1/2->B:x,y,z Immunoglobulin-related Interaction Interface Pymol