Domain ID e3cusC1

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  • A: few secondary structure elements
  • X: Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
  • H: Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
  • T: Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
  • F: NiFe_hyd_SSU_C
UID: 000346293
Type: Automatic domain
Parent: e1ublS1
Range: C:177-264
Ligands: F3S GOL SF4
PDB: 3cus
PDB Description: PERIPLASMIC [NIFE] HYDROGENASE SMALL SUBUNIT
UniProt: P18187
Species: Desulfovibrio fructosivorans

Structure of domain e3cusC1

Domains in the same chain:

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e3cusC2 C:5-176 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e3cusC1 C:177-264 Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit

Domains in the same PDB:

e3cusA2 A:3-176 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e3cusA1 A:177-264 Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
e3cusB2 B:3-176 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e3cusB1 B:177-264 Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
e3cusC2 C:5-176 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e3cusC1 C:177-264 Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
e3cusQ3 Q:6-49,Q:508-549 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3cusQ4 Q:50-92,Q:459-507 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3cusQ2 Q:93-326,Q:379-458 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit
e3cusQ1 Q:327-378 all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit
e3cusR3 R:5-49,R:508-549 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3cusR4 R:50-92,R:459-507 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3cusR2 R:93-326,R:379-458 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit
e3cusR1 R:327-378 all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit
e3cusS3 S:6-49,S:508-549 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3cusS4 S:50-92,S:459-507 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e3cusS2 S:93-326,S:379-458 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit
e3cusS1 S:327-378 all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit

Structural contacts of domain e3cusC1 of H-group "Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3cusA2 C:x,y,z->A:X,Y,Z Class I glutamine amidotransferase-like Interaction Interface Pymol