Domain ID e3d23B1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel
  • F: Peptidase_C30
UID: 001098998
Type: Automatic domain
Parent: e2ducA2
Range: B:0-186
Ligands: 3IH
PDB: 3d23
PDB Description: 3C-like proteinase
UniProt: Q0ZJJ1
Species:

Structure of domain e3d23B1

Domains in the same chain:

e3d23B1 B:0-186 cradle loop barrel RIFT-related FMN-binding split barrel
e3d23B2 B:187-300 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain

Domains in the same PDB:

e3d23A1 A:-1-186 cradle loop barrel RIFT-related FMN-binding split barrel
e3d23A2 A:187-300 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
e3d23B1 B:0-186 cradle loop barrel RIFT-related FMN-binding split barrel
e3d23B2 B:187-300 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
e3d23C1 C:2-186 cradle loop barrel RIFT-related FMN-binding split barrel
e3d23C2 C:187-299 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain
e3d23D1 D:1-186 cradle loop barrel RIFT-related FMN-binding split barrel
e3d23D2 D:187-299 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain

Structural contacts of domain e3d23B1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3d23D2 B:x,y,z->D:-Y+1,X,Z+1/4 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e3d23D1 B:x,y,z->D:-Y+1,X,Z+1/4 RIFT-related Interaction Interface Pymol
e3d23B1 B:x,y,z->B:-Y+1,X,Z+1/4 RIFT-related Interaction Interface Pymol
e3d23B1 B:-Y+1,X,Z+1/4->B:x,y,z RIFT-related Interaction Interface Pymol
e3d23B2 B:-Y+1,X,Z+1/4->B:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e3d23C2 B:X,Y,Z->C:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e3d23D2 B:X,Y,Z->D:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e3d23D1 B:X,Y,Z->D:x,y,z RIFT-related Interaction Interface Pymol