Domain ID e3d3qA1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: IPPT
UID: 001508977
Type: Automatic domain
Parent: e3exaA1
Range: A:6-116,A:193-315
PDB: 3d3q
PDB Description: tRNA delta(2)-isopentenylpyrophosphate transferase
UniProt: Q8CQL3
Hsap BLAST neighbor: Q9H3H1
Species:

Structure of domain e3d3qA1

Structural contacts of domain e3d3qA1 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3d3qB1 A:X,Y,Z->B:x,y,z P-loop domains-related Interaction Interface Pymol
e3d3qB2 A:x,y,z->B:-X,Y-1/2,-Z+1 tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain Interaction Interface Pymol
e3d3qA1 A:x,y,z->A:-X,Y-1/2,-Z+1 P-loop domains-related Interaction Interface Pymol
e3d3qA1 A:-X,Y-1/2,-Z+1->A:x,y,z P-loop domains-related Interaction Interface Pymol
e3d3qA2 A:-X,Y-1/2,-Z+1->A:x,y,z tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain Interaction Interface Pymol
e3d3qB1 A:x,y,z->B:-X+1,Y-1/2,-Z+1 P-loop domains-related Interaction Interface Pymol
e3d3qA1 A:x,y,z->A:-X+1,Y-1/2,-Z+1 P-loop domains-related Interaction Interface Pymol
e3d3qA1 A:-X+1,Y-1/2,-Z+1->A:x,y,z P-loop domains-related Interaction Interface Pymol