Domain ID e3d4gB3

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: SBP_bac_1
UID: 001519955
Type: Automatic domain
Parent: e1laxA2
Range: B:3-112,B:261-371
Ligands: CA MAL
PDB: 3d4g
PDB Description: Maltose-binding periplasmic protein, LINKER, Zona pellucida protein 3
Species: Mus musculus

Structure of domain e3d4gB3

Domains in the same chain:

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e3d4gB3 B:3-112,B:261-371 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gB1 B:113-260 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gB2 B:372-473 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3d4gA3 A:3-112,A:261-371 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gA1 A:113-260 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gA2 A:372-473 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3d4gB3 B:3-112,B:261-371 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gB1 B:113-260 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gB2 B:372-473 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3d4gC3 C:3-112,C:261-371 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gC1 C:113-260 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gC2 C:372-473 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3d4gD1 D:5-112,D:261-371 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gD3 D:113-260 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gD2 D:372-473 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3d4gE3 E:3-112,E:261-371 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gE1 E:113-260 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gE2 E:372-474 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3d4gF1 F:3-112,F:261-371 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gF3 F:113-260 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gF2 F:372-474 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3d4gG1 G:3-112,G:261-371 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gG3 G:113-260 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gG2 G:372-474 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3d4gH3 H:5-112,H:261-371 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gH1 H:113-260 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3d4gH2 H:372-473 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3d4gB3 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3d4gC2 B:X,Y,Z->C:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3d4gA2 B:x,y,z->A:X,Y-1,Z Immunoglobulin-related Interaction Interface Pymol
e3d4gC3 B:x,y,z->C:X,Y-1,Z Periplasmic binding protein-like II Interaction Interface Pymol