Domain ID e3d54A3

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: PurM C-terminal domain-like
  • T: PurM C-terminal domain-like
  • F: PurL_C
UID: 000066730
Type: Automatic domain
Parent: e1vk3A3
Range: A:508-603
Ligands: ADP
PDB: 3d54
PDB Description: Phosphoribosylformylglycinamidine synthase II
UniProt: Q9X0X3
Species: Thermotoga maritima

Structure of domain e3d54A3

Domains in the same chain:

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e3d54A1 A:2-34 RuvA-C FGAM synthase PurL, linker domain FGAM synthase PurL, linker domain
e3d54A4 A:35-165 Bacillus chorismate mutase-like PurM N-terminal domain-like PurM N-terminal domain-like
e3d54A2 A:167-345 Alpha-beta plaits PurM C-terminal domain-like PurM C-terminal domain-like
e3d54A5 A:346-507 Bacillus chorismate mutase-like PurM N-terminal domain-like PurM N-terminal domain-like
e3d54A3 A:508-603 Alpha-beta plaits PurM C-terminal domain-like PurM C-terminal domain-like

Domains in the same PDB:

e3d54A1 A:2-34 RuvA-C FGAM synthase PurL, linker domain FGAM synthase PurL, linker domain
e3d54A4 A:35-165 Bacillus chorismate mutase-like PurM N-terminal domain-like PurM N-terminal domain-like
e3d54A2 A:167-345 Alpha-beta plaits PurM C-terminal domain-like PurM C-terminal domain-like
e3d54A5 A:346-507 Bacillus chorismate mutase-like PurM N-terminal domain-like PurM N-terminal domain-like
e3d54A3 A:508-603 Alpha-beta plaits PurM C-terminal domain-like PurM C-terminal domain-like
e3d54B1 B:1-82 Alpha-beta plaits PurS-like PurS-like
e3d54C1 C:1-82 Alpha-beta plaits PurS-like PurS-like
e3d54D1 D:1-212 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e3d54E1 E:2-34 RuvA-C FGAM synthase PurL, linker domain FGAM synthase PurL, linker domain
e3d54E4 E:35-165 Bacillus chorismate mutase-like PurM N-terminal domain-like PurM N-terminal domain-like
e3d54E2 E:167-345 Alpha-beta plaits PurM C-terminal domain-like PurM C-terminal domain-like
e3d54E5 E:346-507 Bacillus chorismate mutase-like PurM N-terminal domain-like PurM N-terminal domain-like
e3d54E3 E:508-603 Alpha-beta plaits PurM C-terminal domain-like PurM C-terminal domain-like
e3d54F1 F:1-82 Alpha-beta plaits PurS-like PurS-like
e3d54G1 G:1-82 Alpha-beta plaits PurS-like PurS-like
e3d54H1 H:1-212 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like
e3d54I1 I:2-34 RuvA-C FGAM synthase PurL, linker domain FGAM synthase PurL, linker domain
e3d54I4 I:35-165 Bacillus chorismate mutase-like PurM N-terminal domain-like PurM N-terminal domain-like
e3d54I2 I:167-345 Alpha-beta plaits PurM C-terminal domain-like PurM C-terminal domain-like
e3d54I5 I:346-507 Bacillus chorismate mutase-like PurM N-terminal domain-like PurM N-terminal domain-like
e3d54I3 I:508-603 Alpha-beta plaits PurM C-terminal domain-like PurM C-terminal domain-like
e3d54J1 J:1-82 Alpha-beta plaits PurS-like PurS-like
e3d54K1 K:1-82 Alpha-beta plaits PurS-like PurS-like
e3d54L1 L:1-212 Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferase-like

Structural contacts of domain e3d54A3 of H-group "PurM C-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3d54D1 A:X,Y,Z->D:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol
e3d54J1 A:x,y,z->J:-X+1/2,Y-1/2,-Z PurS-like Interaction Interface Pymol
e3d54E3 A:X,Y,Z->E:x,y,z PurM C-terminal domain-like Interaction Interface Pymol
e3d54C1 A:-X,Y,-Z->C:x,y,z PurS-like Interaction Interface Pymol
e3d54K1 A:x,y,z->K:-X+1/2,Y-1/2,-Z PurS-like Interaction Interface Pymol