ECOD: domain e3d5rD1

Domain ID e3d5rD1

A: alpha bundles
X: Spectrin repeat-like
H: Efb C-domain-like
T: Efb C-domain-like
F: efb-c

UID:	000055265
Type:	Automatic domain
Parent:	e2gomA1
Range:	D:15-75
PDB:	3d5r
PDB Description:	Fibrinogen-binding protein
UniProt:	A6QG59
Species:

Domain
In chain context
In PDB context

Structure of domain e3d5rD1

Domains in the same chain:

Download Pymol

e3d5rD1	D:15-75	Spectrin repeat-like	Efb C-domain-like	Efb C-domain-like

Domains in the same PDB:

e3d5rA1	A:12-297	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid
e3d5rB1	B:12-297	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid
e3d5rC1	C:15-75	Spectrin repeat-like	Efb C-domain-like	Efb C-domain-like
e3d5rD1	D:15-75	Spectrin repeat-like	Efb C-domain-like	Efb C-domain-like

Structural contacts of domain e3d5rD1 of H-group "Efb C-domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3d5rB1	D:x,y,z->B:X,Y,Z	alpha/alpha toroid	Interaction Interface Pymol
e3d5rB1	D:-Y-1,X,Z+1/4->B:x,y,z	alpha/alpha toroid	Interaction Interface Pymol