Domain ID e3d6m.1

Download files:
  • A: a/b three-layered sandwiches
  • X: Caspase-like
  • H: Caspase-like
  • T: Caspase-like
  • F: Peptidase_C14
UID: 001043481
Type: Automatic domain
Parent: e1nme.1
Range: A:138-293,B:326-403,A:125-137,B:317-404
PDB: 3d6m
PDB Description: Caspase-1
UniProt: P29466
Hsap BLAST neighbor: P29466
Species:

Structure of domain e3d6m.1

Domains in the same chain:

e3d6m.1 A:138-293,B:326-403,A:125-137,B:317-404 Caspase-like Caspase-like Caspase-like

Domains in the same PDB:

e3d6m.1 A:138-293,B:326-403,A:125-137,B:317-404 Caspase-like Caspase-like Caspase-like

Structural contacts of domain e3d6m.1 of H-group "Caspase-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3d6m.1 B:x,y,z->A:X,Y,Z Caspase-like Interaction Interface Pymol
e3d6m.1 A:X,Y,Z->B:x,y,z Caspase-like Interaction Interface Pymol
e3d6m.1 B:x,y,z->B:-Y+1,-X+1,-Z+1/2 Caspase-like Interaction Interface Pymol
e3d6m.1 B:-Y+1,-X+1,-Z+1/2->B:x,y,z Caspase-like Interaction Interface Pymol
e3d6m.1 B:x,y,z->A:-Y+1,-X+1,-Z+1/2 Caspase-like Interaction Interface Pymol
e3d6m.1 A:-Y+1,-X+1,-Z+1/2->B:x,y,z Caspase-like Interaction Interface Pymol
e3d6m.1 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4 Caspase-like Interaction Interface Pymol
e3d6m.1 A:X-1/2,-Y+1/2,-Z+1/4->A:x,y,z Caspase-like Interaction Interface Pymol
e3d6m.1 A:x,y,z->A:-Y+1,-X+1,-Z+1/2 Caspase-like Interaction Interface Pymol
e3d6m.1 A:-Y+1,-X+1,-Z+1/2->A:x,y,z Caspase-like Interaction Interface Pymol
e3d6m.1 A:x,y,z->A:-Y+3/2,X-1/2,Z-1/4 Caspase-like Interaction Interface Pymol
e3d6m.1 A:-Y+3/2,X-1/2,Z-1/4->A:x,y,z Caspase-like Interaction Interface Pymol
e3d6m.1 A:x,y,z->A:-Y+1,-X+2,-Z+1/2 Caspase-like Interaction Interface Pymol
e3d6m.1 A:-Y+1,-X+2,-Z+1/2->A:x,y,z Caspase-like Interaction Interface Pymol
e3d6m.1 B:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4 Caspase-like Interaction Interface Pymol
e3d6m.1 A:X-1/2,-Y+1/2,-Z+1/4->B:x,y,z Caspase-like Interaction Interface Pymol