ECOD: domain e3dkqA3

Domain ID e3dkqA3

A: beta sandwiches
X: jelly-roll
H: Double-stranded beta-helix
T: Double-stranded beta-helix
F: 2OG-FeII_Oxy_3

UID:	001381092
Type:	Automatic domain
Parent:	e5c5uA1
Range:	A:-5-180
Ligands:	GOL IMD NI
PDB:	3dkq
PDB Description:	PKHD-type hydroxylase Sbal_3634
UniProt:	A3D8P6
Species:

Domains in the same chain:

Download Pymol

e3dkqA3	A:-5-180	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3dkqA2	A:68-71,A:181-224	YqgQ-like	YqgQ-like	YqgQ-like

Domains in the same PDB:

e3dkqA3	A:-5-180	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3dkqA2	A:68-71,A:181-224	YqgQ-like	YqgQ-like	YqgQ-like
e3dkqB1	B:-5-180	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3dkqB2	B:181-224	YqgQ-like	YqgQ-like	YqgQ-like
e3dkqC1	C:-4-180	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3dkqC2	C:68-71,C:181-224	YqgQ-like	YqgQ-like	YqgQ-like

Structural contacts of domain e3dkqA3 of H-group "Double-stranded beta-helix":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3dkqC2	A:-Y+1,-X+1,-Z-1/2->C:x,y,z	YqgQ-like	Interaction Interface Pymol
e3dkqC1	A:-Y+1,-X+1,-Z-1/2->C:x,y,z	Double-stranded beta-helix	Interaction Interface Pymol
e3dkqB1	A:x,y,z->B:-Y+3/2,X+1/2,Z+1/4	Double-stranded beta-helix	Interaction Interface Pymol
e3dkqC1	A:X,Y,Z->C:x,y,z	Double-stranded beta-helix	Interaction Interface Pymol
e3dkqC2	A:X,Y,Z->C:x,y,z	YqgQ-like	Interaction Interface Pymol
e3dkqA3	A:x,y,z->A:Y,X,-Z	Double-stranded beta-helix	Interaction Interface Pymol
e3dkqA3	A:Y,X,-Z->A:x,y,z	Double-stranded beta-helix	Interaction Interface Pymol
e3dkqC1	A:X,Y,Z-1->C:x,y,z	Double-stranded beta-helix	Interaction Interface Pymol