| UID: | 000135150 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1qf9A1 |
| Range: | A:1-125,A:161-217 |
| Ligands: | AP5 EDO MG |
| PDB: | 3dkv |
| PDB Description: | Adenylate kinase |
| UniProt: | P16304 |
| Hsap BLAST neighbor: | P00568 |
| Species: | Bacillus subtilis |
Structure of domain e3dkvA2
Domains in the same chain:
| e3dkvA2 | A:1-125,A:161-217 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e3dkvA1 | A:126-160 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
Domains in the same PDB:
| e3dkvA2 | A:1-125,A:161-217 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e3dkvA1 | A:126-160 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
Structural contacts of domain e3dkvA2 of H-group "P-loop domains-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3dkvA2 | A:x,y,z->A:X-1/2,-Y-1/2,-Z | P-loop domains-related | Interaction Interface Pymol |
| e3dkvA2 | A:X-1/2,-Y-1/2,-Z->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e3dkvA2 | A:x,y,z->A:-X-1,Y-1/2,-Z-1/2 | P-loop domains-related | Interaction Interface Pymol |
| e3dkvA1 | A:x,y,z->A:-X-1,Y-1/2,-Z-1/2 | Rubredoxin-related | Interaction Interface Pymol |
| e3dkvA2 | A:-X-1,Y-1/2,-Z-1/2->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e3dkvA2 | A:x,y,z->A:-X,Y-1/2,-Z-1/2 | P-loop domains-related | Interaction Interface Pymol |
| e3dkvA2 | A:-X,Y-1/2,-Z-1/2->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e3dkvA1 | A:X-1,Y,Z->A:x,y,z | Rubredoxin-related | Interaction Interface Pymol |
