ECOD: domain e3dl2A2

Domain ID e3dl2A2

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: NAD(P)-binding Rossmann-fold domains
F: Ldh_1_N

UID:	000345237
Type:	Automatic domain
Parent:	e2cmdA2
Range:	A:169-309
Ligands:	NA PO4
PDB:	3dl2
PDB Description:	UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 3
UniProt:	Q8IX04
Hsap BLAST neighbor:	Q8IX04
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e3dl2A2	A:169-309	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3dl2A3	A:317-471	LDH C-terminal domain-like	LDH C-terminal domain-like	LDH C-terminal domain-like

Domains in the same PDB:

e3dl2A2	A:169-309	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3dl2A3	A:317-471	LDH C-terminal domain-like	LDH C-terminal domain-like	LDH C-terminal domain-like
e3dl2B2	B:169-309	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3dl2B1	B:317-471	LDH C-terminal domain-like	LDH C-terminal domain-like	LDH C-terminal domain-like

Structural contacts of domain e3dl2A2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3dl2B1	A:X,Y,Z->B:x,y,z	LDH C-terminal domain-like	Interaction Interface Pymol
e3dl2B2	A:X,Y,Z->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e3dl2A3	A:x,y,z->A:X-Y,X,Z-1/6	LDH C-terminal domain-like	Interaction Interface Pymol
e3dl2B2	A:x,y,z->B:X-Y,X,Z-1/6	Rossmann-related	Interaction Interface Pymol
e3dl2B1	A:x,y,z->B:-Y,X-Y+1,Z-1/3	LDH C-terminal domain-like	Interaction Interface Pymol