ECOD: domain e3dlbA5

Domain ID e3dlbA5

A: mixed a+b and a/b
X: Ribonuclease H-like
H: Ribonuclease H-like
T: Ribonuclease H-like
F: Unmapped domains

UID:	001189110
Type:	Automatic and representative domain
Range:	A:469-642
PDB:	3dlb
PDB Description:	argonaute
UniProt:	Q746M7
Species:	Thermus thermophilus

Domain
In chain context
In PDB context

Structure of domain e3dlbA5

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e3dlbA6	A:3-25,A:97-176,A:264-316	Alpha-beta plaits	Argonaute, N-terminal domain	Argonaute, N-terminal domain
e3dlbA4	A:26-97	Alpha-beta plaits	Argonaute, N-terminal domain	Argonaute, N-terminal domain
e3dlbA3	A:177-263	SH3	SH3	SH3
e3dlbA7	A:317-468	Middle domain in Argonaute homologs	Middle domain in Argonaute homologs	Middle domain in Argonaute homologs
e3dlbA5	A:469-642	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3dlbB2	B:6-25,B:97-176,B:264-316	Alpha-beta plaits	Argonaute, N-terminal domain	Argonaute, N-terminal domain
e3dlbB1	B:26-96	Alpha-beta plaits	Argonaute, N-terminal domain	Argonaute, N-terminal domain
e3dlbB3	B:177-263	SH3	SH3	SH3
e3dlbB5	B:317-468	Middle domain in Argonaute homologs	Middle domain in Argonaute homologs	Middle domain in Argonaute homologs
e3dlbB4	B:469-642	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like

Structural contacts of domain e3dlbA5 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3dlbB4	A:X,Y,Z->B:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e3dlbB4	A:X,Y,Z->B:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e3dlbB4	A:x,y,z->B:-X+1,Y-1/2,-Z+2	Ribonuclease H-like	Interaction Interface Pymol
e3dlbB4	A:x,y,z->B:-X+1,Y-1/2,-Z+2	Ribonuclease H-like	Interaction Interface Pymol
e3dlbB2	A:x,y,z->B:-X+1,Y-1/2,-Z+2	Argonaute, N-terminal domain	Interaction Interface Pymol