ECOD: domain e3dnfA2

Domain ID e3dnfA2

A: a/b three-layered sandwiches
X: NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
H: NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
T: NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
F: LYTB

UID:	001031053
Type:	Manual and representative domain
Range:	A:1-95
Ligands:	F3S
PDB:	3dnf
PDB Description:	4-hydroxy-3-methylbut-2-enyl diphosphate reductase
UniProt:	O67625
Species:	Aquifex aeolicus

Domains in the same chain:

Download Pymol

e3dnfA2	A:1-95	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3dnfA3	A:96-192	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3dnfA1	A:193-281	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase

Domains in the same PDB:

e3dnfA2	A:1-95	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3dnfA3	A:96-192	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3dnfA1	A:193-281	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3dnfB4	B:1-95	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3dnfB2	B:96-192	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3dnfB3	B:193-282	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase

Structural contacts of domain e3dnfA2 of H-group "NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3dnfA2	A:X-1,Y,Z->B:x,y,z	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	Interaction Interface Pymol
e3dnfB2	A:X-1,Y,Z->B:x,y,z	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	Interaction Interface Pymol
e3dnfB2	A:-X+1,Y-1/2,-Z+1->B:x,y,z	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	Interaction Interface Pymol
e3dnfA3	A:-X+2,Y-1/2,-Z+1->A:x,y,z	NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase	Interaction Interface Pymol