Domain ID e3dolA7

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RVT_1
UID: 001186998
Type: Automatic domain
Parent: e1ztwA1
Range: A:1-239
Ligands: GWI
PDB: 3dol
PDB Description: Reverse transcriptase/ribonuclease H
UniProt: A7YKL0
Hsap BLAST neighbor: P63135
Species:

Structure of domain e3dolA7

Domains in the same chain:

e3dolA7 A:1-239 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3dolA6 A:240-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3dolA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3dolA8 A:429-540 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e3dolA7 A:1-239 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3dolA6 A:240-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3dolA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3dolA8 A:429-540 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3dolB2 B:5-241 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3dolB1 B:242-315 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3dolB3 B:316-427 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e3dolA7 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3dolB2 A:X,Y,Z->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3dolA8 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Ribonuclease H-like Interaction Interface Pymol
e3dolA5 A:x,y,z->A:-X,Y-1/2,-Z+1/2 RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3dolA6 A:x,y,z->A:-X,Y-1/2,-Z+1/2 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3dolB2 A:-X+1/2,-Y-1,Z-1/2->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3dolB2 A:X,Y,Z-1->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3dolB3 A:X,Y,Z-1->B:x,y,z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3dolA5 A:X,Y,Z-1->A:x,y,z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3dolA6 A:x,y,z->A:-X,Y-1/2,-Z+3/2 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3dolB3 A:x,y,z->B:X-1/2,-Y-1/2,-Z+1 RNaseH-like domain in reverse transcriptase Interaction Interface Pymol