ECOD: domain e3dpbA5

Domain ID e3dpbA5

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: PapD_N

UID:	001162168
Type:	Automatic domain
Parent:	e2j2zA2
Range:	A:9-104,A:125-138
PDB:	3dpb
PDB Description:	Chaperone protein caf1M
UniProt:	P26926
Species:	Yersinia pestis

Domain
In chain context
In PDB context

Structure of domain e3dpbA5

Domains in the same chain:

Download Pymol

e3dpbA5	A:9-104,A:125-138	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3dpbA6	A:139-234	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3dpbA5	A:9-104,A:125-138	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3dpbA6	A:139-234	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3dpbB1	B:1-149	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e3dpbC1	C:19-149	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f

Structural contacts of domain e3dpbA5 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3dpbB1	A:X,Y,Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3dpbB1	A:x,y,z->B:X-1/2,-Y+1/2,-Z	Immunoglobulin-related	Interaction Interface Pymol
e3dpbC1	A:x,y,z->C:X,Y,Z-1	Immunoglobulin-related	Interaction Interface Pymol