Domain ID e3dphB1

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  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein-C
  • T: Retrovirus capsid protein-C
  • F: Gag_p24_C
UID: 000347489
Type: Automatic domain
Parent: e1a8oA1
Range: B:147-226
PDB: 3dph
PDB Description: HIV-1 CAPSID PROTEIN
UniProt: P12497
Hsap BLAST neighbor: P63145
Species: Human immunodeficiency virus 1

Structure of domain e3dphB1

Structural contacts of domain e3dphB1 of H-group "Retrovirus capsid protein-C":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3dphA1 B:x,y,z->A:X,Y,Z Retrovirus capsid protein-C Interaction Interface Pymol
e3dphA1 B:x,y,z->A:-X,Y-1/2,-Z Retrovirus capsid protein-C Interaction Interface Pymol
e3dphA1 B:x,y,z->A:-X+1,Y-1/2,-Z Retrovirus capsid protein-C Interaction Interface Pymol
e3dphA1 B:x,y,z->A:X,Y,Z-1 Retrovirus capsid protein-C Interaction Interface Pymol
e3dphB1 B:x,y,z->B:X,Y,Z-1 Retrovirus capsid protein-C Interaction Interface Pymol
e3dphB1 B:X,Y,Z-1->B:x,y,z Retrovirus capsid protein-C Interaction Interface Pymol
e3dphB1 B:x,y,z->B:X-1,Y,Z Retrovirus capsid protein-C Interaction Interface Pymol
e3dphB1 B:X-1,Y,Z->B:x,y,z Retrovirus capsid protein-C Interaction Interface Pymol
e3dphA1 B:x,y,z->A:X-1,Y,Z-1 Retrovirus capsid protein-C Interaction Interface Pymol
e3dphB1 B:x,y,z->B:X-1,Y,Z-1 Retrovirus capsid protein-C Interaction Interface Pymol
e3dphB1 B:X-1,Y,Z-1->B:x,y,z Retrovirus capsid protein-C Interaction Interface Pymol