Domain ID e3dpjD2

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  • A: alpha bundles
  • X: Tetracyclin repressor-like, C-terminal domain
  • H: Tetracyclin repressor-like, C-terminal domain
  • T: Tetracyclin repressor-like, C-terminal domain
  • F: TetR_C_13_2
UID: 000347497
Type: Automatic domain
Parent: e1sgmA2
Range: D:72-191
Ligands: EDO MES
PDB: 3dpj
PDB Description: TRANSCRIPTION REGULATOR, TETR FAMILY
UniProt: Q5LS67
Species: Ruegeria pomeroyi

Structure of domain e3dpjD2

Domains in the same chain:

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e3dpjD1 D:2-71 HTH HTH tri-helical
e3dpjD2 D:72-191 Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain

Domains in the same PDB:

e3dpjA1 A:-2-71 HTH HTH tri-helical
e3dpjA2 A:72-191 Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain
e3dpjB1 B:2-71 HTH HTH tri-helical
e3dpjB2 B:72-191 Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain
e3dpjC1 C:-2-71 HTH HTH tri-helical
e3dpjC2 C:72-191 Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain
e3dpjD1 D:2-71 HTH HTH tri-helical
e3dpjD2 D:72-191 Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain
e3dpjE1 E:-1-71 HTH HTH tri-helical
e3dpjE2 E:72-191 Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain
e3dpjF1 F:3-71 HTH HTH tri-helical
e3dpjF2 F:72-190 Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain
e3dpjG1 G:-1-71 HTH HTH tri-helical
e3dpjG2 G:72-191 Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain
e3dpjH1 H:3-71 HTH HTH tri-helical
e3dpjH2 H:72-190 Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain Tetracyclin repressor-like, C-terminal domain

Structural contacts of domain e3dpjD2 of H-group "Tetracyclin repressor-like, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3dpjC1 D:x,y,z->C:X,Y,Z HTH Interaction Interface Pymol
e3dpjC2 D:x,y,z->C:X,Y,Z Tetracyclin repressor-like, C-terminal domain Interaction Interface Pymol
e3dpjA1 D:x,y,z->A:X-1,Y+1,Z+1 HTH Interaction Interface Pymol
e3dpjG2 D:X,Y,Z->G:x,y,z Tetracyclin repressor-like, C-terminal domain Interaction Interface Pymol
e3dpjE2 D:X,Y,Z-1->E:x,y,z Tetracyclin repressor-like, C-terminal domain Interaction Interface Pymol
e3dpjF2 D:X,Y,Z-1->F:x,y,z Tetracyclin repressor-like, C-terminal domain Interaction Interface Pymol