| UID: | 001391180 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3dptB6 |
| Range: | B:698-789 |
| PDB: | 3dpu |
| PDB Description: | Rab family protein |
| UniProt: | Q8KC98 |
| Species: | Chlorobaculum tepidum |
Structure of domain e3dpuB2
Domains in the same chain:
| e3dpuB3 | B:626-697 | HTH | HTH | winged |
| e3dpuB2 | B:698-789 | HTH | HTH | winged |
| e3dpuB1 | B:790-940 | TBP-like | C-terminal TBP-like domain of Roc | C-terminal TBP-like domain of Roc |
Domains in the same PDB:
| e3dpuA3 | A:420-624 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
| e3dpuA4 | A:625-697 | HTH | HTH | winged |
| e3dpuA2 | A:698-789 | HTH | HTH | winged |
| e3dpuA1 | A:790-938 | TBP-like | C-terminal TBP-like domain of Roc | C-terminal TBP-like domain of Roc |
| e3dpuB3 | B:626-697 | HTH | HTH | winged |
| e3dpuB2 | B:698-789 | HTH | HTH | winged |
| e3dpuB1 | B:790-940 | TBP-like | C-terminal TBP-like domain of Roc | C-terminal TBP-like domain of Roc |
Structural contacts of domain e3dpuB2 of H-group "HTH":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3dpuA3 | B:x,y,z->A:X,Y,Z | P-loop domains-related | Interaction Interface Pymol |
| e3dpuB3 | B:x,y,z->B:X-1/2,-Y+1/2,-Z-1 | HTH | Interaction Interface Pymol |
| e3dpuB2 | B:x,y,z->B:X-1/2,-Y+1/2,-Z-1 | HTH | Interaction Interface Pymol |
| e3dpuB1 | B:X-1/2,-Y+1/2,-Z-1->B:x,y,z | C-terminal TBP-like domain of Roc | Interaction Interface Pymol |
| e3dpuB2 | B:X-1/2,-Y+1/2,-Z-1->B:x,y,z | HTH | Interaction Interface Pymol |
