| UID: | 000059685 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1dceA2 |
| Range: | A:55-369 |
| Ligands: | FPP |
| PDB: | 3dpy |
| PDB Description: | Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha |
| UniProt: | Q04631 |
| Hsap BLAST neighbor: | P49354 |
| Species: | Rattus norvegicus |
Structure of domain e3dpyA1
Domains in the same chain:
| e3dpyA1 | A:55-369 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
Domains in the same PDB:
| e3dpyA1 | A:55-369 | Repetitive alpha hairpins | ARM repeat | ARM repeat |
| e3dpyB1 | B:22-421 | Repetitive alpha hairpins | alpha/alpha toroid | alpha/alpha toroid |
Structural contacts of domain e3dpyA1 of H-group "ARM repeat":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3dpyB1 | A:X,Y,Z->B:x,y,z | alpha/alpha toroid | Interaction Interface Pymol |
| e3dpyA1 | A:x,y,z->A:X-Y,X,Z+1/6 | ARM repeat | Interaction Interface Pymol |
| e3dpyA1 | A:X-Y,X,Z+1/6->A:x,y,z | ARM repeat | Interaction Interface Pymol |
| e3dpyB1 | A:x,y,z->B:X,Y,Z-1 | alpha/alpha toroid | Interaction Interface Pymol |
| e3dpyA1 | A:x,y,z->A:-Y+1,X-Y,Z-2/3 | ARM repeat | Interaction Interface Pymol |
| e3dpyA1 | A:-Y+1,X-Y,Z-2/3->A:x,y,z | ARM repeat | Interaction Interface Pymol |
| e3dpyB1 | A:x,y,z->B:-X+1,-Y,Z-1/2 | alpha/alpha toroid | Interaction Interface Pymol |
| e3dpyB1 | A:-Y+1,X-Y,Z+1/3->B:x,y,z | alpha/alpha toroid | Interaction Interface Pymol |
| e3dpyB1 | A:-Y+1,X-Y,Z-2/3->B:x,y,z | alpha/alpha toroid | Interaction Interface Pymol |
