ECOD: domain e3draB1

Domain ID e3draB1

A: alpha superhelices
X: Repetitive alpha hairpins
H: alpha/alpha toroid
T: alpha/alpha toroid
F: Prenyltrans

UID:	000169063
Type:	Automatic domain
Parent:	e2h6fB1
Range:	B:2-390
Ligands:	GRG ZN
PDB:	3dra
PDB Description:	Geranylgeranyltransferase type I beta subunit
UniProt:	Q59KC5
Hsap BLAST neighbor:	P53609
Species:	Candida albicans

Domains in the same chain:

Download Pymol

e3draB1	B:2-390	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid

Domains in the same PDB:

e3draA1	A:3-304	Repetitive alpha hairpins	ARM repeat	ARM repeat
e3draB1	B:2-390	Repetitive alpha hairpins	alpha/alpha toroid	alpha/alpha toroid

Structural contacts of domain e3draB1 of H-group "alpha/alpha toroid":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3draA1	B:x,y,z->A:X,Y,Z	ARM repeat	Interaction Interface Pymol
e3draA1	B:x,y,z->A:-X+1/2,Y-1/2,-Z+1	ARM repeat	Interaction Interface Pymol
e3draA1	B:x,y,z->A:X-1/2,Y-1/2,Z	ARM repeat	Interaction Interface Pymol
e3draA1	B:x,y,z->A:-X+1/2,Y-1/2,-Z	ARM repeat	Interaction Interface Pymol
e3draA1	B:x,y,z->A:X,Y-1,Z	ARM repeat	Interaction Interface Pymol
e3draA1	B:x,y,z->A:X-1/2,Y+1/2,Z	ARM repeat	Interaction Interface Pymol
e3draB1	B:x,y,z->B:-X+1/2,Y-1/2,-Z	alpha/alpha toroid	Interaction Interface Pymol
e3draB1	B:-X+1/2,Y-1/2,-Z->B:x,y,z	alpha/alpha toroid	Interaction Interface Pymol
e3draB1	B:x,y,z->B:X-1/2,Y+1/2,Z	alpha/alpha toroid	Interaction Interface Pymol
e3draB1	B:X-1/2,Y+1/2,Z->B:x,y,z	alpha/alpha toroid	Interaction Interface Pymol