ECOD: domain e3dsrB6

Domain ID e3dsrB6

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: ATP-synt_ab

UID:	001213067
Type:	Automatic domain
Parent:	e2jdiA3
Range:	B:77-354
Ligands:	ADP
PDB:	3dsr
PDB Description:	V-TYPE ATP SYNTHASE BETA CHAIN
UniProt:	Q60187
Hsap BLAST neighbor:	P21281
Species:	Methanosarcina mazei

Domain
In chain context
In PDB context

Structure of domain e3dsrB6

Domains in the same chain:

Download Pymol

e3dsrB7	B:11-76	cradle loop barrel	RIFT-related	Alanine racemase-C
e3dsrB6	B:77-354	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3dsrB2	B:355-456	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase

Domains in the same PDB:

e3dsrA7	A:12-74	cradle loop barrel	RIFT-related	Alanine racemase-C
e3dsrA6	A:75-354	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3dsrA2	A:355-457	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase
e3dsrB7	B:11-76	cradle loop barrel	RIFT-related	Alanine racemase-C
e3dsrB6	B:77-354	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3dsrB2	B:355-456	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase	C-terminal domain of alpha and beta subunits of F1 ATP synthase

Structural contacts of domain e3dsrB6 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3dsrA6	B:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e3dsrA2	B:x,y,z->A:X,Y,Z	C-terminal domain of alpha and beta subunits of F1 ATP synthase	Interaction Interface Pymol
e3dsrA7	B:-X-1,Y-1/2,-Z+1/2->A:x,y,z	RIFT-related	Interaction Interface Pymol
e3dsrA7	B:x,y,z->A:-X-1/2,-Y,Z-1/2	RIFT-related	Interaction Interface Pymol