ECOD: domain e3e0jD1

Domain ID e3e0jD1

A: alpha arrays
X: HTH
H: HTH
T: winged
F: CDC27

UID:	000353897
Type:	Automatic domain
Parent:	e3e0jB1
Range:	D:2-144
PDB:	3e0j
PDB Description:	DNA polymerase subunit delta-3
UniProt:	Q15054
Hsap BLAST neighbor:	Q15054
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3e0jD1

Domains in the same chain:

Download Pymol

e3e0jD1	D:2-144	HTH	HTH	winged

Domains in the same PDB:

e3e0jA2	A:-3-41,A:180-465	Carbon-nitrogen hydrolase-like	Metallo-dependent phosphatases	Metallo-dependent phosphatases
e3e0jA3	A:50-101,A:124-179	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3e0jB1	B:2-144	HTH	HTH	winged
e3e0jC2	C:-3-41,C:180-458	Carbon-nitrogen hydrolase-like	Metallo-dependent phosphatases	Metallo-dependent phosphatases
e3e0jC5	C:49-101,C:124-179	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3e0jD1	D:2-144	HTH	HTH	winged
e3e0jE2	E:-3-41,E:180-458	Carbon-nitrogen hydrolase-like	Metallo-dependent phosphatases	Metallo-dependent phosphatases
e3e0jE5	E:49-101,E:124-179	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3e0jF1	F:2-144	HTH	HTH	winged
e3e0jG2	G:-3-41,G:180-458	Carbon-nitrogen hydrolase-like	Metallo-dependent phosphatases	Metallo-dependent phosphatases
e3e0jG5	G:49-101,G:124-179	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3e0jH1	H:2-144	HTH	HTH	winged

Structural contacts of domain e3e0jD1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3e0jB1	D:x,y,z->C:X,Y,Z	HTH	Interaction Interface Pymol
e3e0jB1	D:x,y,z->E:X,Y,Z	HTH	Interaction Interface Pymol
e3e0jB1	D:x,y,z->A:X,Y,Z	HTH	Interaction Interface Pymol